Gene: TCTN1 ENSG00000204852

Description

tectonic family member 1 [Source:HGNC Symbol;Acc:26113]

Gene Synonyms

FLJ21127, JBTS13, TECT1

Location

Chromosome 12: 111,051,832-111,087,235 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 28 transcripts (splice variants), 193 orthologues, 2 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397659.4	TCTN1-009	1885	592aa	ENSP00000380779.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41834	Q2MV58	NM_001173976.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000551590.1	TCTN1-001	2309	587aa	ENSP00000448735.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41835	A8MW34 Q2MV58	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000550703.2	TCTN1-021	2149	245aa	ENSP00000473789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIB9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000397655.3	TCTN1-019	1879	573aa	ENSP00000380775.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41833	Q2MV58	NM_024549.5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000377654.3	TCTN1-201	1667	260aa	ENSP00000366882.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q2MV58	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000471804.2	TCTN1-024	718	162aa	ENSP00000473903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R339	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000549123.1	TCTN1-032	458	72aa	ENSP00000450154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQ12	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000397656.4	TCTN1-012	2098	179aa	ENSP00000380776.4	Nonsense mediated decay		J3KPW2	-	-
ENST00000464809.1	TCTN1-003	1996	100aa	ENSP00000435027.1	Nonsense mediated decay		E9PIB8 S4R3M8	-	-
ENST00000495659.2	TCTN1-004	1988	100aa	ENSP00000436673.2	Nonsense mediated decay		E9PIB8 S4R3M8	-	-
ENST00000478122.2	TCTN1-005	1919	100aa	ENSP00000474208.1	Nonsense mediated decay		E9PIB8 S4R3M8	-	-
ENST00000480648.1	TCTN1-002	1891	263aa	ENSP00000437196.1	Nonsense mediated decay		E9PNE4	-	-
ENST00000490514.1	TCTN1-006	1874	83aa	ENSP00000436044.1	Nonsense mediated decay		E9PR69	-	-
ENST00000546643.1	TCTN1-026	926	88aa	ENSP00000473743.1	Nonsense mediated decay		S4R2Y1	-	-
ENST00000552318.1	TCTN1-027	593	88aa	ENSP00000474343.1	Nonsense mediated decay		S4R2Y1	-	-
ENST00000481720.1	TCTN1-010	589	106aa	ENSP00000474291.1	Nonsense mediated decay		S4R3G2	-	-
ENST00000498072.1	TCTN1-011	573	75aa	ENSP00000474525.1	Nonsense mediated decay		S4R3M8	-	-
ENST00000547461.2	TCTN1-030	370	94aa	ENSP00000448188.2	Nonsense mediated decay		F8VSB8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551555.2	TCTN1-022	634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552762.1	TCTN1-028	282	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460357.1	TCTN1-020	4209	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482281.2	TCTN1-013	1141	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552038.1	TCTN1-033	960	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481093.1	TCTN1-017	685	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485445.1	TCTN1-015	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491068.1	TCTN1-014	632	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547868.1	TCTN1-025	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463313.1	TCTN1-016	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: TCTN1 ENSG00000204852

Summary