Gene: HLA-F ENSG00000204642

Description

major histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:4963]

Gene Synonyms

CDA12, HLA-5.4, HLA-CDA12, HLAF

Location

Chromosome 6: 29,690,552-29,706,305 forward strand.

GRCh37:CM000668.1

View alleles of this gene on alternative sequences

About this gene

This gene has 17 transcripts (splice variants), 1 gene allele, 260 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000259951.7	HLA-F-003	1506	442aa	ENSP00000259951.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43437	F6T2Q8 O78094 P30511 Q5JZ48	NM_001098479.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440587.2	HLA-F-204	1622	259aa	ENSP00000404130.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PGX5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000376861.1	HLA-F-001	1544	346aa	ENSP00000366057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43438	F6T2Q8 O78094 P30511	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000334668.4	HLA-F-203	1281	346aa	ENSP00000334263.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43438	F6T2Q8 O78094 P30511	NM_018950.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000434407.2	HLA-F-002	884	254aa	ENSP00000397376.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43439	F6T2Q8 O78094 P30511	NM_001098478.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000429294.1	HLA-F-006	796	225aa	ENSP00000416998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000414333.1	HLA-F-004	578	131aa	ENSP00000389590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6T2Q8 O78094	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444621.1	HLA-F-005	495	124aa	ENSP00000392251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475996.1	HLA-F-013	1505	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484704.1	HLA-F-012	1201	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462777.1	HLA-F-007	779	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485513.1	HLA-F-011	778	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465459.1	HLA-F-014	623	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486194.1	HLA-F-010	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482257.1	HLA-F-009	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000606273.1	HLA-F-015	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489502.1	HLA-F-008	489	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Favourite species

All species

Recent locations

Gene: HLA-F ENSG00000204642

Summary