Description
leukocyte specific transcript 1 [Source:HGNC Symbol;Acc:14189]
Gene Synonyms
B144, D6S49E, LST-1
Location
Chromosome 6: 31,553,901-31,556,686 forward strand.
GRCh37:CM000668.1
View alleles of this gene on alternative sequences
About this gene
This gene has 24 transcripts (splice variants), 1 gene allele and 47 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000376093.2 | LST1-022 | 648 | 104aa | ENSP00000365261.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54984 | O00453 Q5HYT5 | NM_007161.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000438075.2 | LST1-001 | 764 | 97aa | ENSP00000391929.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43450 | O00453 Q5HYT5 | NM_205839.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000376111.4 | LST1-203 | 763 | 63aa | ENSP00000365279.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8MT08 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000418507.2 | LST1-011 | 726 | 66aa | ENSP00000405900.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4705 | O00453 | NM_205838.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000376090.2 | LST1-015 | 689 | 28aa | ENSP00000365258.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5STB1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000376089.2 | LST1-017 | 680 | 66aa | ENSP00000365257.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4705 | O00453 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000339530.4 | LST1-002 | 635 | 66aa | ENSP00000339201.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54985 | O00453 Q5HYT5 | NM_205837.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000376102.3 | LST1-202 | 624 | 91aa | ENSP00000365270.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O00453 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000376099.1 | LST1-012 | 610 | 28aa | ENSP00000365267.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5STB1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000303757.8 | LST1-005 | 604 | 59aa | ENSP00000303649.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54986 | O00453 Q5HYT5 | NM_205840.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000376096.1 | LST1-008 | 565 | 13aa | ENSP00000365264.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O00453 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000376086.3 | LST1-006 | 554 | 73aa | ENSP00000365254.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54987 | O00453 | NM_001166538.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000211921.7 | LST1-003 | 504 | 28aa | ENSP00000211921.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5STB1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000396101.3 | LST1-023 | 459 | 44aa | ENSP00000379408.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q2HNT4 Q5HYT5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000376110.3 | LST1-004 | 433 | 51aa | ENSP00000365278.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O00453 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000396112.2 | LST1-019 | 382 | 66aa | ENSP00000379418.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F2Z2M1 Q5HYT5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000376100.3 | LST1-201 | 345 | 35aa | ENSP00000365268.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O00453 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000376092.3 | LST1-007 | 285 | 35aa | ENSP00000365260.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O00453 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000464044.1 | LST1-025 | 278 | 35aa | ENSP00000417645.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000490742.1 | LST1-024 | 273 | 60aa | ENSP00000418578.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000433492.1 | LST1-013 | 254 | 36aa | ENSP00000399869.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5HYT5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000419073.1 | LST1-018 | 259 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000464526.1 | LST1-009 | 1832 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460834.1 | LST1-021 | 455 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
