Description
superkiller viralicidic activity 2-like (S. cerevisiae) [Source:HGNC Symbol;Acc:10898]
Gene Synonyms
170A, DDX13, HLP, SKI2, SKI2W, SKIV2, THES2, W
Location
Chromosome 6: 31,926,857-31,937,532 forward strand.
GRCh37:CM000668.1
View alleles of this gene on alternative sequences
About this gene
This gene has 16 transcripts (splice variants), 1 gene allele, 185 orthologues, 8 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000375394.2 | SKIV2L-001 | 3894 | 1246aa | ENSP00000364543.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4731 | B4DM01 F5H7B0 Q15477 Q9BQJ5 Q9NPK3 | NM_006929.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544581.1 | SKIV2L-201 | 3378 | 1053aa | ENSP00000442645.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7B0 Q9BQJ5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000491994.1 | SKIV2L-013 | 866 | 182aa | ENSP00000417586.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000474839.1 | SKIV2L-017 | 3378 | 69aa | ENSP00000420470.1 | Nonsense mediated decay | F8WDE8 | - | - | |
| ENST00000483553.1 | SKIV2L-010 | 1307 | 156aa | ENSP00000420332.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000461073.1 | SKIV2L-016 | 1157 | 230aa | ENSP00000419905.1 | Nonsense mediated decay | B4E0B4 | - | - | |
| ENST00000488648.1 | SKIV2L-003 | 720 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000471818.1 | SKIV2L-012 | 706 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000461915.1 | SKIV2L-007 | 691 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470453.1 | SKIV2L-011 | 455 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000465703.1 | SKIV2L-002 | 4507 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484835.1 | SKIV2L-009 | 931 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494058.1 | SKIV2L-008 | 867 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485349.1 | SKIV2L-014 | 734 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492900.1 | SKIV2L-005 | 686 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000466290.1 | SKIV2L-006 | 583 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
