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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCAMP5 ENSG00000198794

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Description

secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:30386]

Gene Synonyms

MGC24969

Location

Chromosome 15: 75,249,560-75,313,837 forward strand.

GRCh37:CM000677.1

About this gene

This gene has 19 transcripts (splice variants) and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361900.6	SCAMP5-002	3427	235aa	ENSP00000355387.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45306	H3BNB3 H3BNH7 H3BNW6 H3BP89 H3BS22 H3BT30 H3BTD1 Q8TAC9	NM_001178111.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425597.3	SCAMP5-001	3411	235aa	ENSP00000406547.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45306	H3BNB3 H3BNH7 H3BNW6 H3BP89 H3BS22 H3BT30 H3BTD1 Q8TAC9	NM_138967.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562212.1	SCAMP5-004	3400	243aa	ENSP00000455313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNB3 H3BNH7 H3BP89 H3BS22 H3BT30 H3BTD1 Q8TAC9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545456.1	SCAMP5-201	3270	164aa	ENSP00000439685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TAC9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568081.1	SCAMP5-012	710	168aa	ENSP00000454602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMY4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568018.1	SCAMP5-016	601	98aa	ENSP00000456991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNB3 H3BP89 H3BT30 H3BTD1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567920.1	SCAMP5-018	588	123aa	ENSP00000454860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNB3 H3BNH7 H3BP89 H3BS22 H3BT30 H3BTD1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562327.1	SCAMP5-017	579	116aa	ENSP00000456505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNB3 H3BP89 H3BS22 H3BT30 H3BTD1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566872.1	SCAMP5-006	561	95aa	ENSP00000454766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNB3 H3BP89 H3BTD1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568119.1	SCAMP5-008	557	46aa	ENSP00000457444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP89 H3BU33	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565989.1	SCAMP5-009	554	69aa	ENSP00000457121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP89 H3BTD1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564779.1	SCAMP5-014	516	148aa	ENSP00000455039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNB3 H3BNH7 H3BNW6 H3BP89 H3BS22 H3BT30 H3BTD1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562765.1	SCAMP5-003	1206	45aa	ENSP00000455598.1	Nonsense mediated decay		H3BP89	-	-
ENST00000568423.1	SCAMP5-005	1142	45aa	ENSP00000457520.1	Nonsense mediated decay		H3BP89	-	-
ENST00000567529.1	SCAMP5-013	966	45aa	ENSP00000455203.1	Nonsense mediated decay		H3BP89	-	-
ENST00000564491.1	SCAMP5-015	532	45aa	ENSP00000458072.1	Nonsense mediated decay		H3BP89	-	-
ENST00000565923.1	SCAMP5-011	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564141.1	SCAMP5-007	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567535.1	SCAMP5-010	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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