Description
CCR4-NOT transcription complex, subunit 7 [Source:HGNC Symbol;Acc:14101]
Gene Synonyms
CAF1, Caf1a, hCAF-1
Location
Chromosome 8: 17,086,737-17,104,387 reverse strand.
GRCh37:CM000670.1
About this gene
This gene has 12 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000361272.4 | CNOT7-001 | 2649 | 285aa | ENSP00000355279.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6000 | E5RGH2 E5RJE0 Q9UIV1 | NM_013354.5 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000523917.1 | CNOT7-002 | 1885 | 244aa | ENSP00000429093.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55202 | E5RGH2 E5RJE0 Q9UIV1 | NM_054026.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000524358.1 | CNOT7-007 | 700 | 147aa | ENSP00000430160.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGH2 E5RJE0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000519918.1 | CNOT7-011 | 680 | 208aa | ENSP00000428147.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000520178.1 | CNOT7-008 | 568 | 40aa | ENSP00000429079.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJE0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000518541.1 | CNOT7-012 | 426 | 91aa | ENSP00000430263.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000519954.1 | CNOT7-006 | 1209 | 51aa | ENSP00000429632.1 | Nonsense mediated decay | E5RHV9 | - | - | |
| ENST00000518021.1 | CNOT7-005 | 768 | 62aa | ENSP00000428783.1 | Nonsense mediated decay | E5RGA8 | - | - | |
| ENST00000518885.1 | CNOT7-009 | 477 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000519998.1 | CNOT7-003 | 1909 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000523649.1 | CNOT7-004 | 699 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000522062.1 | CNOT7-010 | 444 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
