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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SYCP1 ENSG00000198765

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Description

synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:11487]

Gene Synonyms

CT8, HOM-TES-14, SCP-1, SCP1

Location

Chromosome 1: 115,397,424-115,537,991 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 8 transcripts (splice variants) and 181 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369522.3	SYCP1-001	3522	976aa	ENSP00000358535.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS879	Q15431 Q5VXJ5	NM_003176.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000369518.1	SYCP1-002	3452	976aa	ENSP00000358531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS879	Q15431 Q5VXJ5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000455987.1	SYCP1-003	2554	792aa	ENSP00000410011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VXJ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477590.1	SYCP1-008	800	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493377.1	SYCP1-007	783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482717.1	SYCP1-006	763	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477215.1	SYCP1-005	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468191.1	SYCP1-004	396	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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