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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C1orf85 ENSG00000198715

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Description

chromosome 1 open reading frame 85 [Source:HGNC Symbol;Acc:29436]

Gene Synonyms

MGC31963, NCU-G1

Location

Chromosome 1: 156,259,880-156,265,463 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 12 transcripts (splice variants) and 197 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000362007.1	C1orf85-001	1604	406aa	ENSP00000354553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1139	Q8WWB7	NM_144580.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000481050.1	C1orf85-012	684	111aa	ENSP00000477187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472870.1	C1orf85-007	1188	130aa	ENSP00000477180.1	Nonsense mediated decay		-	-	-
ENST00000368264.1	C1orf85-006	837	183aa	ENSP00000357247.1	Nonsense mediated decay		-	-	-
ENST00000476177.2	C1orf85-002	795	89aa	ENSP00000477253.1	Nonsense mediated decay		-	-	-
ENST00000461597.1	C1orf85-009	658	75aa	ENSP00000476260.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482579.1	C1orf85-011	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497831.1	C1orf85-008	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480968.1	C1orf85-010	524	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497955.1	C1orf85-004	1002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484214.1	C1orf85-005	943	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479084.1	C1orf85-003	906	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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