Description
cyclic nucleotide gated channel alpha 1 [Source:HGNC Symbol;Acc:2148]
Gene Synonyms
CNCG, CNCG1, CNG-1, CNG1, RCNC1, RCNCa, RCNCalpha, RP49
Location
Chromosome 4: 47,937,994-48,018,689 reverse strand.
GRCh37:CM000666.1
About this gene
This gene has 9 transcripts (splice variants), 274 orthologues, 17 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000402813.3 | CNGA1-001 | 2867 | 759aa | ENSP00000384264.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47050 | D6R978 D6RCF1 P29973 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544810.1 | CNGA1-202 | 2863 | 690aa | ENSP00000443401.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43226 | D6R978 D6RCF1 P29973 | NM_001142564.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000514170.1 | CNGA1-006 | 2837 | 690aa | ENSP00000426862.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43226 | D6R978 D6RCF1 P29973 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000420489.2 | CNGA1-007 | 2746 | 690aa | ENSP00000389881.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43226 | D6R978 D6RCF1 P29973 | NM_000087.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000358519.4 | CNGA1-201 | 2627 | 690aa | ENSP00000351320.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43226 | D6R978 D6RCF1 P29973 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000513178.1 | CNGA1-005 | 589 | 99aa | ENSP00000423327.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R978 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000504722.1 | CNGA1-008 | 543 | 128aa | ENSP00000423721.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R978 D6RCF1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000514520.1 | CNGA1-009 | 405 | 99aa | ENSP00000421110.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R978 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000506118.1 | CNGA1-004 | 701 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
