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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SPN ENSG00000197471

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Description

sialophorin [Source:HGNC Symbol;Acc:11249]

Gene Synonyms

CD43, GALGP, GPL115, LSN

Location

Chromosome 16: 29,674,300-29,682,187 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 5 transcripts (splice variants) and 80 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360121.3	SPN-201	6854	400aa	ENSP00000353238.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10650	A8K9B1 C9JUK7 P16150	NM_003123.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395389.2	SPN-001	1935	400aa	ENSP00000378787.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10650	A8K9B1 C9JUK7 P16150	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000436527.1	SPN-002	1197	355aa	ENSP00000412907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUK7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563039.1	SPN-003	1843	400aa	ENSP00000455266.1	Nonsense mediated decay	CCDS10650	A8K9B1 C9JUK7 P16150	-	-
ENST00000561857.1	SPN-004	2077	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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