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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC39A10 ENSG00000196950

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Description

solute carrier family 39 (zinc transporter), member 10 [Source:HGNC Symbol;Acc:20861]

Gene Synonyms

DKFZp564L2123, FLJ90515, KIAA1265, LZT-Hs2, ZIP10

Location

Chromosome 2: 196,440,701-196,602,426 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 10 transcripts (splice variants), 185 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409086.3	SLC39A10-002	5432	831aa	ENSP00000386766.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33353	B4DGU0 C9J0F5 E7ENT5 E7EV45 Q8NC35 Q9ULF5	NM_001127257.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000359634.5	SLC39A10-001	5322	831aa	ENSP00000352655.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33353	B4DGU0 C9J0F5 E7ENT5 E7EV45 Q8NC35 Q9ULF5	NM_020342.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541054.1	SLC39A10-201	2219	381aa	ENSP00000437787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DGU0 Q8NC35	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000458054.1	SLC39A10-007	593	126aa	ENSP00000389640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F5 E7ENT5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418005.1	SLC39A10-009	563	130aa	ENSP00000409272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F5 E7ENT5 E7EV45	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412905.1	SLC39A10-012	337	38aa	ENSP00000406590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430412.1	SLC39A10-003	4478	39aa	ENSP00000394995.1	Nonsense mediated decay		F2Z341	-	-
ENST00000444421.1	SLC39A10-006	544	39aa	ENSP00000394469.1	Nonsense mediated decay		F2Z341	-	-
ENST00000464301.1	SLC39A10-013	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465851.1	SLC39A10-011	2009	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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