Description
PDZ and LIM domain 7 (enigma) [Source:HGNC Symbol;Acc:22958]
Gene Synonyms
ENIGMA, LMP1, LMP3
Location
Chromosome 5: 176,910,395-176,924,607 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 17 transcripts (splice variants), 198 orthologues and 7 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000355841.2 | PDLIM7-001 | 1689 | 457aa | ENSP00000348099.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4422 | D6RAN1 D6RF83 Q9NR12 | NM_005451.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000356618.4 | PDLIM7-201 | 1647 | 287aa | ENSP00000349030.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAN1 D6RF83 Q9NR12 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000359895.2 | PDLIM7-003 | 1567 | 423aa | ENSP00000352964.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4423 | D6RAN1 Q9NR12 | NM_203352.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000393551.1 | PDLIM7-007 | 1226 | 287aa | ENSP00000377182.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAN1 D6RF83 Q9NR12 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000355572.2 | PDLIM7-004 | 977 | 222aa | ENSP00000347776.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4424 | D6RAN1 D6RF83 Q9NR12 | NM_213636.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000505074.1 | PDLIM7-015 | 931 | 287aa | ENSP00000426213.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAN1 D6RF83 D6RH06 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000506161.1 | PDLIM7-009 | 759 | 173aa | ENSP00000424850.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAN1 D6RF83 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000393546.4 | PDLIM7-012 | 671 | 195aa | ENSP00000377177.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAN1 H7BYK4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000506537.1 | PDLIM7-010 | 636 | 90aa | ENSP00000421664.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAN1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000486828.2 | PDLIM7-006 | 1904 | 191aa | ENSP00000439157.1 | Nonsense mediated decay | D6RAN1 D6RF83 Q9NR12 | - | - | |
| ENST00000493815.1 | PDLIM7-002 | 1686 | 153aa | ENSP00000431236.1 | Nonsense mediated decay | D6RAN1 Q9NR12 | - | - | |
| ENST00000503827.1 | PDLIM7-013 | 451 | 120aa | ENSP00000422363.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000505746.1 | PDLIM7-016 | 405 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000463411.1 | PDLIM7-008 | 1015 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000503346.1 | PDLIM7-011 | 669 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504318.1 | PDLIM7-014 | 597 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504380.1 | PDLIM7-017 | 556 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
