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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: NIF3L1 ENSG00000196290

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Description

NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:13390]

Gene Synonyms

ALS2CR1, CALS-7, MDS015

Location

Chromosome 2: 201,754,050-201,768,655 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 9 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409020.1	NIF3L1-004	1680	377aa	ENSP00000386394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46485	B8ZZI0 C9JN42 E7EXA3 Q658J0 Q9GZT8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409357.1	NIF3L1-003	1679	377aa	ENSP00000387315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46485	B8ZZI0 C9JN42 E7EXA3 Q658J0 Q9GZT8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000359683.4	NIF3L1-001	1626	350aa	ENSP00000352711.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42797	B8ZZI0 E7EXA3 Q658J0 Q9GZT8	NM_021824.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000416651.1	NIF3L1-201	1479	377aa	ENSP00000400787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46485	B8ZZI0 C9JN42 E7EXA3 Q658J0 Q9GZT8	NM_001142355.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409588.1	NIF3L1-005	1269	285aa	ENSP00000387021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46486	B8ZZI0 C9JN42 E7EXA3 Q9GZT8	NM_001142356.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409129.2	NIF3L1-009	813	162aa	ENSP00000387061.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZI0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426253.1	NIF3L1-007	749	209aa	ENSP00000412761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZI0 E7EXA3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454952.1	NIF3L1-008	719	162aa	ENSP00000394955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JN42	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000436412.1	NIF3L1-010	479	84aa	ENSP00000399336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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