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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COLCA1 ENSG00000196167

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Description

colorectal cancer associated 1 [Source:HGNC Symbol;Acc:33789]

Gene Synonyms

C11orf92, CASC12, FLJ45803

Location

Chromosome 11: 111,164,114-111,175,770 reverse strand.

GRCh37:CM000673.1

About this gene

This gene has 4 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000532918.1	COLCA1-001	5496	124aa	ENSP00000437253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZS62	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000355430.4	COLCA1-002	5442	124aa	ENSP00000347601.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZS62	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000540738.1	COLCA1-201	375	124aa	ENSP00000438980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZS62	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000526150.1	COLCA1-003	391	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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