Description
splicing factor 3b, subunit 3, 130kDa [Source:HGNC Symbol;Acc:10770]
Gene Synonyms
KIAA0017, RSE1, SAP130, SF3b130, STAF130
Location
Chromosome 16: 70,557,691-70,608,820 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 14 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000302516.5 | SF3B3-001 | 6969 | 1217aa | ENSP00000305790.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10894 | B3KM77 H3BMB0 I3L4G7 J3QL37 J3QRB2 Q15393 | NM_012426.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000564899.1 | SF3B3-004 | 551 | 4aa | ENSP00000461342.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000577085.1 | SF3B3-018 | 529 | 72aa | ENSP00000461236.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMB0 I3L4G7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566095.2 | SF3B3-003 | 453 | 30aa | ENSP00000454308.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMB0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000567654.1 | SF3B3-006 | 334 | 57aa | ENSP00000463359.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QL37 J3QRB2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000569687.1 | SF3B3-005 | 333 | 31aa | ENSP00000464126.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QRB2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000567635.1 | SF3B3-007 | 630 | 91aa | ENSP00000463253.1 | Nonsense mediated decay | J3QKV4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000563739.1 | SF3B3-010 | 1105 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000567250.1 | SF3B3-008 | 1084 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000568291.2 | SF3B3-009 | 1067 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000565990.2 | SF3B3-014 | 967 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562722.1 | SF3B3-011 | 881 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000572365.1 | SF3B3-016 | 575 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000568539.1 | SF3B3-012 | 555 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
