Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: RNFT1 ENSG00000189050

.

Description

ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:30206]

Gene Synonyms

PTD016

Location

Chromosome 17: 58,029,601-58,042,122 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 10 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305783.8	RNFT1-001	2101	435aa	ENSP00000304670.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11622	Q5M7Z0	NM_016125.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000442346.2	RNFT1-201	1218	135aa	ENSP00000389049.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJR4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000589113.1	RNFT1-007	740	223aa	ENSP00000464987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ18	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482446.1	RNFT1-002	1893	245aa	ENSP00000436144.1	Nonsense mediated decay		Q5M7Z0	-	-
ENST00000466544.1	RNFT1-003	1809	172aa	ENSP00000436533.1	Nonsense mediated decay		B4DJR4 E9PI44	-	-
ENST00000484257.1	RNFT1-005	618	71aa	ENSP00000436909.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586083.1	RNFT1-008	1425	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477207.1	RNFT1-004	884	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486103.2	RNFT1-009	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493737.1	RNFT1-006	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.