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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: FAM78B ENSG00000188859

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Description

family with sequence similarity 78, member B [Source:HGNC Symbol;Acc:13495]

Location

Chromosome 1: 166,026,674-166,136,206 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 5 transcripts (splice variants), 269 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338353.3	FAM78B-201	1597	261aa	ENSP00000339681.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30931	Q5VT40	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000354422.3	FAM78B-001	1475	261aa	ENSP00000346404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30931	Q5VT40	NM_001017961.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000435676.1	FAM78B-002	4399	254aa	ENSP00000412766.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000456900.1	FAM78B-004	2300	261aa	ENSP00000389945.1	Nonsense mediated decay	CCDS30931	Q5VT40	-	-
ENST00000441649.1	FAM78B-003	2264	257aa	ENSP00000393329.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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