Description
TMEM256-PLSCR3 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:49186]
Location
Chromosome 17: 7,293,046-7,307,416 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 13 transcripts (splice variants), 392 orthologues and 4 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000535512.1 | TMEM256-PLSCR3-201 | 2557 | 295aa | ENSP00000438547.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42253 | I3L4F5 Q9NRY6 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000574401.1 | TMEM256-PLSCR3-003 | 2032 | 295aa | ENSP00000459019.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42253 | I3L4F5 Q9NRY6 | NM_020360.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000576201.1 | TMEM256-PLSCR3-004 | 1965 | 295aa | ENSP00000459419.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42253 | I3L4F5 Q9NRY6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000324822.11 | TMEM256-PLSCR3-001 | 1689 | 295aa | ENSP00000316021.11 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42253 | I3L4F5 Q9NRY6 | NM_001201576.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000576362.1 | TMEM256-PLSCR3-008 | 1605 | 271aa | ENSP00000460800.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L3X5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000575434.1 | TMEM256-PLSCR3-013 | 851 | 171aa | ENSP00000461843.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4F5 I3NI29 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000571078.1 | TMEM256-PLSCR3-011 | 724 | 170aa | ENSP00000458596.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L161 I3L4F5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000571802.1 | TMEM256-PLSCR3-010 | 583 | 35aa | ENSP00000461205.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4F5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573213.1 | TMEM256-PLSCR3-009 | 581 | 118aa | ENSP00000458988.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1P6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573070.1 | TMEM256-PLSCR3-002 | 1740 | 148aa | ENSP00000459122.1 | Nonsense mediated decay | I3L1P6 I3L1V1 | - | - | |
| ENST00000571541.1 | TMEM256-PLSCR3-007 | 2310 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000573774.1 | TMEM256-PLSCR3-005 | 2056 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000575543.1 | TMEM256-PLSCR3-006 | 1672 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
