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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SECISBP2 ENSG00000187742

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Description

SECIS binding protein 2 [Source:HGNC Symbol;Acc:30972]

Gene Synonyms

SBP2

Location

Chromosome 9: 91,933,421-91,974,557 forward strand.

GRCh37:CM000671.1

About this gene

This gene has 9 transcripts (splice variants), 188 orthologues, 1 paralogue and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375807.3	SECISBP2-001	3454	854aa	ENSP00000364965.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6683	F8W892 Q6AW84 Q7L1Z0 Q96T21 Q9H948	NM_024077.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000339901.4	SECISBP2-004	3320	781aa	ENSP00000364959.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65076	Q7L1Z0 Q96T21 Q9H948	NM_001282689.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534113.2	SECISBP2-201	3085	786aa	ENSP00000436650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65077	F8W892 Q7L1Z0 Q9H948	NM_001282690.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000425851.1	SECISBP2-002	826	275aa	ENSP00000414288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5HYY5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000440898.1	SECISBP2-003	547	60aa	ENSP00000411573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4V370	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470305.1	SECISBP2-005	5405	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496597.1	SECISBP2-007	1195	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498819.1	SECISBP2-008	854	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477484.1	SECISBP2-006	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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