Description
two pore segment channel 1 [Source:HGNC Symbol;Acc:18182]
Gene Synonyms
FLJ20612, KIAA1169, TPC1
Location
Chromosome 12: 113,658,855-113,736,390 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 23 transcripts (splice variants), 201 orthologues and 26 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000550785.1 | TPCN1-002 | 5345 | 888aa | ENSP00000448083.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44985 | B7Z3R2 F8VR74 F8VV93 F8VZZ6 F8W1G4 F8W1L6 Q9ULQ1 | NM_001143819.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000335509.6 | TPCN1-001 | 5274 | 816aa | ENSP00000335300.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31908 | B7Z3R2 F8VR74 F8VV93 F8W1G4 F8W1L6 Q9ULQ1 | NM_017901.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000541517.1 | TPCN1-201 | 5175 | 888aa | ENSP00000438125.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44985 | B7Z3R2 F8VR74 F8VV93 F8VZZ6 F8W1G4 F8W1L6 Q9ULQ1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000392569.4 | TPCN1-003 | 2558 | 748aa | ENSP00000376350.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z3R2 F8VR74 F8VV93 F8W1L6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000552542.1 | TPCN1-022 | 828 | 120aa | ENSP00000446767.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VV93 F8W1L6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552985.1 | TPCN1-016 | 762 | 215aa | ENSP00000447569.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VZZ6 F8W0P9 F8W1G4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000546781.1 | TPCN1-011 | 610 | 204aa | ENSP00000449564.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000552897.1 | TPCN1-021 | 596 | 107aa | ENSP00000449944.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VV93 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548465.1 | TPCN1-013 | 593 | 145aa | ENSP00000448561.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR74 F8VV93 F8W1L6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551099.1 | TPCN1-020 | 570 | 99aa | ENSP00000447181.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W0K7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547275.1 | TPCN1-015 | 564 | 147aa | ENSP00000449560.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VVY9 F8W1G4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549279.1 | TPCN1-014 | 544 | 99aa | ENSP00000448704.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W0K7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551096.1 | TPCN1-019 | 530 | 124aa | ENSP00000447263.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VZZ6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550873.1 | TPCN1-018 | 527 | 85aa | ENSP00000447073.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W1G4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552642.1 | TPCN1-017 | 526 | 126aa | ENSP00000447806.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VS97 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547955.1 | TPCN1-009 | 609 | 104aa | ENSP00000448010.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000546787.1 | TPCN1-007 | 312 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000552077.1 | TPCN1-005 | 3293 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551127.1 | TPCN1-006 | 2975 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000428632.3 | TPCN1-004 | 2296 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546907.1 | TPCN1-008 | 565 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000550543.1 | TPCN1-010 | 558 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546503.1 | TPCN1-012 | 389 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
