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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SMYD4 ENSG00000186532

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Description

SET and MYND domain containing 4 [Source:HGNC Symbol;Acc:21067]

Gene Synonyms

KIAA1936, ZMYND21

Location

Chromosome 17: 1,682,779-1,733,928 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 7 transcripts (splice variants), 211 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305513.7	SMYD4-001	4384	804aa	ENSP00000304360.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11013	I3L2P4 I3L428 I3L496 Q8IYR2	NM_052928.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000491788.1	SMYD4-002	3016	558aa	ENSP00000460921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L428	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000570368.1	SMYD4-005	793	223aa	ENSP00000459819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2P4 I3L496	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571854.1	SMYD4-003	586	177aa	ENSP00000461089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L496	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576633.1	SMYD4-006	515	72aa	ENSP00000459129.1	Nonsense mediated decay		I3L1V4	-	-
ENST00000573937.1	SMYD4-007	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476292.1	SMYD4-004	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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