Description
nuclear pore complex interacting protein family, member B4 [Source:HGNC Symbol;Acc:41985]
Gene Synonyms
KIAA0220L, NPIPB5, NPIPL3
Location
Chromosome 16: 21,845,890-21,892,148 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 23 transcripts (splice variants), 28 orthologues and 19 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000415645.2 | NPIPB4-202 | 3606 | 1138aa | ENSP00000404439.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JB18 C9JG80 E7EQW1 F5GWQ4 F5GYP3 F5H3W2 F5H5F2 F5H6Y6 F5H8A1 H3BQU5 U3KRG3 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000451409.1 | NPIPB4-203 | 3807 | 992aa | ENSP00000392155.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EUG2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000357370.5 | NPIPB4-201 | 2826 | 848aa | ENSP00000349936.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8MSJ3 C9JB18 E7EQW1 F5GWQ4 F5GYP3 F5H3W2 F5H5F2 F5H6Y6 F5H8A1 H3BQU5 U3KRG3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000537951.1 | NPIPB4-204 | 1342 | 420aa | ENSP00000439166.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H3D4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000341400.7 | NPIPB4-004 | 767 | 162aa | ENSP00000339196.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JB18 E7EQW1 F5GWQ4 F5GYP3 F5H3W2 F5H5F2 F5H6Y6 F5H8A1 H3BQU5 U3KRG3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000518761.4 | NPIPB4-001 | 576 | 148aa | ENSP00000429543.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EQW1 F5GWQ4 F5GYP3 F5H3W2 F5H5F2 F5H6Y6 F5H8A1 H3BQU5 U3KRG3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541674.1 | NPIPB4-017 | 544 | 29aa | ENSP00000442065.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5F2 F5H8A1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543654.1 | NPIPB4-007 | 513 | 90aa | ENSP00000439732.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H108 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000544693.1 | NPIPB4-016 | 400 | 27aa | ENSP00000443445.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5F2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542133.1 | NPIPB4-006 | 910 | 40aa | ENSP00000442776.1 | Nonsense mediated decay | F5GWQ4 F5H5F2 F5H8A1 | - | - | |
| ENST00000520808.2 | NPIPB4-002 | 560 | 49aa | ENSP00000429523.2 | Nonsense mediated decay | E5RHP9 F5GWQ4 F5H5F2 F5H8A1 | - | - | |
| ENST00000529969.1 | NPIPB4-003 | 519 | 49aa | ENSP00000433301.1 | Nonsense mediated decay | E5RHP9 F5GWQ4 F5H5F2 F5H8A1 | - | - | |
| ENST00000536041.1 | NPIPB4-018 | 513 | 49aa | ENSP00000439720.1 | Nonsense mediated decay | E5RHP9 F5GWQ4 F5H5F2 F5H8A1 | - | - | |
| ENST00000539318.1 | NPIPB4-019 | 695 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000543449.1 | NPIPB4-015 | 685 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000540103.1 | NPIPB4-005 | 631 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000538859.1 | NPIPB4-014 | 526 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000165086.4 | NPIPB4-012 | 464 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000541329.1 | NPIPB4-010 | 432 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000542338.1 | NPIPB4-008 | 387 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000539191.1 | NPIPB4-009 | 305 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000545367.1 | NPIPB4-013 | 846 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000543660.1 | NPIPB4-011 | 353 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
