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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: YTHDF3 ENSG00000185728

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Description

YTH domain family, member 3 [Source:HGNC Symbol;Acc:26465]

Gene Synonyms

FLJ31657

Location

Chromosome 8: 64,081,112-64,125,346 forward strand.

GRCh37:CM000670.1

About this gene

This gene has 16 transcripts (splice variants), 203 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000539294.1	YTHDF3-201	5153	584aa	ENSP00000473496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMX0 R4GN55	NM_152758.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542911.2	YTHDF3-202	5090	395aa	ENSP00000473387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMX0	NM_001277815.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000517371.1	YTHDF3-010	3122	52aa	ENSP00000473986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R373	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000518373.1	YTHDF3-013	524	99aa	ENSP00000474547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3N5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524135.1	YTHDF3-003	5091	41aa	ENSP00000473317.1	Nonsense mediated decay		R4GMS0	-	-
ENST00000521674.1	YTHDF3-001	5162	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517303.1	YTHDF3-002	2362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520640.1	YTHDF3-006	2295	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523455.1	YTHDF3-015	771	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518438.1	YTHDF3-008	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523056.1	YTHDF3-012	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518763.1	YTHDF3-014	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521547.1	YTHDF3-011	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517375.1	YTHDF3-005	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519428.1	YTHDF3-007	676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522282.1	YTHDF3-004	445	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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