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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C16orf52 ENSG00000185716

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Description

chromosome 16 open reading frame 52 [Source:HGNC Symbol;Acc:27087]

Location

Chromosome 16: 22,018,959-22,098,855 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 7 transcripts (splice variants) and 238 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000542527.2	C16orf52-006	4360	167aa	ENSP00000454926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58431	H3BNM6	NM_001164579.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000569656.1	C16orf52-201	1358	91aa	ENSP00000456262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NHV5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000567004.1	C16orf52-002	951	90aa	ENSP00000456506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BS23	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000562695.1	C16orf52-005	695	108aa	ENSP00000455694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQB3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000331057.4	C16orf52-001	1359	38aa	ENSP00000454543.1	Nonsense mediated decay		H3BMU2	-	-
ENST00000562186.1	C16orf52-004	605	39aa	ENSP00000455164.1	Nonsense mediated decay		H3BP60	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568049.1	C16orf52-003	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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