Description
tumor necrosis factor, alpha-induced protein 2 [Source:HGNC Symbol;Acc:11895]
Gene Synonyms
B94, EXOC3L3
Location
Chromosome 14: 103,589,779-103,603,776 forward strand.
GRCh37:CM000676.1
About this gene
This gene has 13 transcripts (splice variants), 268 orthologues and 4 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000560869.1 | TNFAIP2-001 | 4683 | 654aa | ENSP00000452634.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9979 | B7ZB31 E7EWH2 H0YL88 Q03169 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000333007.1 | TNFAIP2-201 | 4175 | 654aa | ENSP00000332326.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9979 | B7ZB31 E7EWH2 H0YL88 Q03169 | NM_006291.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000559255.1 | TNFAIP2-005 | 1410 | 243aa | ENSP00000452914.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6RNL3 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000560670.1 | TNFAIP2-004 | 1334 | 347aa | ENSP00000453142.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7ZB31 E7EWH2 H0YLC0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000451723.2 | TNFAIP2-202 | 1334 | 323aa | ENSP00000393256.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7ZB31 E7EWH2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000538222.1 | TNFAIP2-203 | 1002 | 199aa | ENSP00000446171.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6RNL3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000558056.1 | TNFAIP2-006 | 421 | 39aa | ENSP00000453103.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YL88 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000559406.1 | TNFAIP2-003 | 1799 | 48aa | ENSP00000452992.1 | Nonsense mediated decay | H0YKY9 | - | - | |
| ENST00000560562.1 | TNFAIP2-002 | 1429 | 97aa | ENSP00000452824.1 | Nonsense mediated decay | H0YKI8 H0YL88 | - | - | |
| ENST00000561156.1 | TNFAIP2-009 | 590 | 66aa | ENSP00000453458.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000561217.1 | TNFAIP2-010 | 603 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000559195.1 | TNFAIP2-007 | 572 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000560428.1 | TNFAIP2-008 | 773 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
