Description
BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit [Source:HGNC Symbol;Acc:11551]
Gene Synonyms
BRF, BRF-1, GTF3B, HEL-S-76p, TAF3B2, TAF3C, TAFIII90, TF3B90, TFIIIB90, hBRF
Location
Chromosome 14: 105,675,623-105,781,926 reverse strand.
GRCh37:CM000676.1
About this gene
This gene has 21 transcripts (splice variants), 213 orthologues, 2 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000546474.1 | BRF1-002 | 18259 | 677aa | ENSP00000448323.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10001 | B3KWA2 F8VQ19 F8VWT8 F8VWY1 F8VXJ4 Q92994 | NM_001519.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000392557.4 | BRF1-001 | 3579 | 473aa | ENSP00000376340.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42001 | B3KWA2 F8VQ19 F8VWT8 F8VWY1 Q92994 | NM_145685.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000379937.2 | BRF1-010 | 3314 | 650aa | ENSP00000369269.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55952 | B3KWA2 F8VQ19 F8VWT8 F8VWY1 F8VXJ4 Q92994 | NM_001242788.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000547530.1 | BRF1-013 | 2876 | 203aa | ENSP00000448387.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KWA2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000446501.2 | BRF1-011 | 2858 | 439aa | ENSP00000389859.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55949 | B3KWA2 F8VQ19 Q92994 | NM_001242789.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000547562.1 | BRF1-023 | 2405 | 281aa | ENSP00000450151.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VQ19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000440513.3 | BRF1-008 | 2368 | 584aa | ENSP00000388877.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55951 | B3KWA2 F8VWT8 F8VWY1 F8VXJ4 Q92994 | NM_001242786.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000327359.3 | BRF1-009 | 2292 | 562aa | ENSP00000329029.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55950 | B3KWA2 F8VQ19 F8VWT8 F8VWY1 F8VXJ4 Q92994 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000549655.1 | BRF1-018 | 1970 | 237aa | ENSP00000448723.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VS45 F8VWT8 F8VWY1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548421.1 | BRF1-012 | 1450 | 208aa | ENSP00000446707.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55953 | Q92994 | NM_001242790.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000550375.1 | BRF1-022 | 1362 | 14aa | ENSP00000447521.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550208.1 | BRF1-019 | 1040 | 45aa | ENSP00000449173.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VWY1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551787.1 | BRF1-007 | 824 | 161aa | ENSP00000446901.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VWY1 Q3SYD7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000379932.4 | BRF1-201 | 813 | 184aa | ENSP00000369264.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A3KN61 F8VWY1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000552127.1 | BRF1-017 | 778 | 155aa | ENSP00000449788.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VWT8 F8VWY1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550692.1 | BRF1-015 | 600 | 63aa | ENSP00000448823.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VXJ4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000546417.1 | BRF1-016 | 554 | 185aa | ENSP00000450258.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VWY1 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000549044.1 | BRF1-021 | 521 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547374.1 | BRF1-014 | 3809 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546997.1 | BRF1-026 | 1999 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547052.1 | BRF1-020 | 771 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
