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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CMSS1 ENSG00000184220

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Description

cms1 ribosomal small subunit homolog (yeast) [Source:HGNC Symbol;Acc:28666]

Gene Synonyms

C3orf26, MGC4308

Location

Chromosome 3: 99,536,678-99,897,447 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 9 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000421999.2	CMSS1-001	1201	279aa	ENSP00000410396.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2935	C9IY68 D3DN44 Q9BQ75	NM_032359.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000489081.1	CMSS1-003	1056	261aa	ENSP00000419161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54618	C9IY68 D3DN44 Q9BQ75	NM_001167924.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000478909.1	CMSS1-006	753	225aa	ENSP00000417293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J384	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497345.1	CMSS1-008	538	82aa	ENSP00000418762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000463526.1	CMSS1-004	397	25aa	ENSP00000418855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IY68	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491299.1	CMSS1-005	881	38aa	ENSP00000418609.1	Nonsense mediated decay		F8WC72	-	-
ENST00000496116.1	CMSS1-002	2145	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494412.1	CMSS1-009	477	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479555.1	CMSS1-007	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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