Description
protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:9635]
Gene Synonyms
HH13, HH7-2, HU-PP-1, OV-1, PRL-2, PRL2, PTP4A, PTPCAAX2, ptp-IV1a, ptp-IV1b
Location
Chromosome 1: 32,372,022-32,410,457 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 20 transcripts (splice variants), 289 orthologues and 8 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000344035.6 | PTP4A2-201 | 3929 | 167aa | ENSP00000344909.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS348 | E9PL34 E9PMY3 Q12974 | NM_080391.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000602725.1 | PTP4A2-019 | 3353 | 167aa | ENSP00000473259.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS348 | E9PL34 E9PMY3 Q12974 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000356536.3 | PTP4A2-202 | 1952 | 82aa | ENSP00000348932.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PL34 E9PMY3 Q12974 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000457805.2 | PTP4A2-020 | 1032 | 136aa | ENSP00000409260.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53292 | E9PL34 Q12974 | NM_001195101.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000534796.1 | PTP4A2-008 | 900 | 22aa | ENSP00000433375.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PL34 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000468531.1 | PTP4A2-007 | 830 | 63aa | ENSP00000437251.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PL34 E9PMY3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000602683.1 | PTP4A2-021 | 667 | 142aa | ENSP00000473490.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59193 | E9PL34 E9PMY3 R4GN50 | - | - |
| ENST00000470404.1 | PTP4A2-006 | 575 | 73aa | ENSP00000435941.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PL34 E9PMY3 E9PRR9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000532001.2 | PTP4A2-016 | 911 | 66aa | ENSP00000433050.1 | Nonsense mediated decay | E9PL34 E9PML8 E9PMY3 | - | - | |
| ENST00000528253.1 | PTP4A2-015 | 806 | 69aa | ENSP00000433800.1 | Nonsense mediated decay | E9PJC0 E9PL34 E9PMY3 | - | - | |
| ENST00000526960.1 | PTP4A2-014 | 793 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000494444.2 | PTP4A2-003 | 678 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000524384.1 | PTP4A2-013 | 663 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000532289.1 | PTP4A2-011 | 610 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000529477.1 | PTP4A2-009 | 568 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528840.1 | PTP4A2-012 | 456 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000533408.1 | PTP4A2-010 | 376 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000475464.1 | PTP4A2-004 | 366 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489313.1 | PTP4A2-002 | 1551 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484483.1 | PTP4A2-005 | 651 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
