Description
general transcription factor IIH, polypeptide 2C [Source:HGNC Symbol;Acc:31394]
Gene Synonyms
GTF2H2
Location
Chromosome 5: 68,856,035-68,890,550 forward strand.
GRCh37:CM000667.1
About this gene
This gene has 16 transcripts (splice variants), 206 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000510979.1 | GTF2H2C-001 | 2952 | 395aa | ENSP00000422907.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43325 | F5GZM1 Q6P1K8 R4GMV2 | NM_001098728.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000508344.2 | GTF2H2C-201 | 1956 | 338aa | ENSP00000423952.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZM1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000380729.3 | GTF2H2C-004 | 1803 | 395aa | ENSP00000370105.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43325 | F5GZM1 Q6P1K8 R4GMV2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000512736.1 | GTF2H2C-007 | 832 | 165aa | ENSP00000427224.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RJD3 R4GMV2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000507595.1 | GTF2H2C-013 | 772 | 253aa | ENSP00000427456.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RID8 R4GMV2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000514162.1 | GTF2H2C-014 | 610 | 123aa | ENSP00000421312.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RGC9 R4GMV2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000446221.2 | GTF2H2C-006 | 1956 | 51aa | ENSP00000403328.2 | Nonsense mediated decay | D6RAW1 R4GMV2 | - | - | |
| ENST00000511629.2 | GTF2H2C-005 | 1872 | 51aa | ENSP00000427486.1 | Nonsense mediated decay | D6RAW1 R4GMV2 | - | - | |
| ENST00000506129.1 | GTF2H2C-011 | 769 | 92aa | ENSP00000427393.1 | Nonsense mediated decay | D6RIT7 R4GMV2 | - | - | |
| ENST00000514069.2 | GTF2H2C-012 | 583 | 51aa | ENSP00000426434.2 | Nonsense mediated decay | D6RAW1 R4GMV2 | - | - | |
| ENST00000513959.2 | GTF2H2C-017 | 713 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000505737.2 | GTF2H2C-009 | 475 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000503604.1 | GTF2H2C-008 | 1176 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000502619.1 | GTF2H2C-003 | 1106 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000508325.1 | GTF2H2C-010 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000502599.1 | GTF2H2C-016 | 412 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
