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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: NPIPA1 ENSG00000183426

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Description

nuclear pore complex interacting protein family, member A1 [Source:HGNC Symbol;Acc:7909]

Gene Synonyms

LCR16a9, NPIP, morpheus

Location

Chromosome 16: 15,016,659-15,045,915 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 8 transcripts (splice variants), 26 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328085.6	NPIPA1-001	1084	350aa	ENSP00000331843.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10557	Q3LIA7 Q9UND3	NM_006985.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000424549.3	NPIPA1-006	657	219aa	ENSP00000410814.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WB45 Q3LIA7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000537062.1	NPIPA1-008	568	185aa	ENSP00000445593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472413.1	NPIPA1-002	5343	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000541836.1	NPIPA1-004	2747	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545831.1	NPIPA1-005	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534720.1	NPIPA1-003	1915	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000545479.1	NPIPA1-007	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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