Description
DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Source:HGNC Symbol;Acc:18674]
Gene Synonyms
ABS, MGC8828
Location
Chromosome 5: 176,938,578-176,944,470 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 17 transcripts (splice variants), 199 orthologues, 38 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000507955.1 | DDX41-001 | 2607 | 622aa | ENSP00000422753.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4427 | B3KRK2 Q9UJV9 | NM_016222.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000330503.7 | DDX41-004 | 2137 | 640aa | ENSP00000330349.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KRK2 J3KNN5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000509576.1 | DDX41-009 | 819 | 201aa | ENSP00000426330.1 | Nonsense mediated decay | D6RGI7 | - | - | |
| ENST00000508279.1 | DDX41-013 | 776 | 173aa | ENSP00000421460.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000504781.1 | DDX41-010 | 618 | 126aa | ENSP00000425739.1 | Nonsense mediated decay | H0YA06 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000510171.1 | DDX41-008 | 569 | 49aa | ENSP00000427082.1 | Nonsense mediated decay | D6RD33 | - | - | |
| ENST00000506965.1 | DDX41-017 | 560 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000505081.1 | DDX41-006 | 2949 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000503078.1 | DDX41-003 | 2375 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000507900.1 | DDX41-007 | 1564 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000515562.1 | DDX41-005 | 1184 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000512431.1 | DDX41-016 | 904 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504807.1 | DDX41-018 | 794 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000511040.1 | DDX41-011 | 721 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000512334.1 | DDX41-015 | 686 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000512027.1 | DDX41-014 | 583 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000513562.1 | DDX41-012 | 552 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
