Gene: CADM1 ENSG00000182985

Description

cell adhesion molecule 1 [Source:HGNC Symbol;Acc:5951]

Gene Synonyms

BL2, IGSF4, IGSF4A, NECL2, Necl-2, RA175, ST17, SYNCAM, SYNCAM1, TSLC1, sTSLC-1, sgIGSF, synCAM1

Location

Chromosome 11: 115,039,938-115,375,675 reverse strand.

GRCh37:CM000673.1

About this gene

This gene has 20 transcripts (splice variants), 277 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000452722.3	CADM1-001	8588	442aa	ENSP00000395359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8373	F5H0H5 F5H8J9 Q6MZK6 Q9BY67	NM_014333.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542447.2	CADM1-002	4223	414aa	ENSP00000439176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53711	F5H0H5 F5H8J9 H1ZZW4 Q9BY67	NM_001098517.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000537058.1	CADM1-005	3550	453aa	ENSP00000439817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0H5 F5H8J9 Q9BY67	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536727.1	CADM1-006	3520	443aa	ENSP00000440322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0H5 F5H8J9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545380.1	CADM1-008	2373	413aa	ENSP00000442387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0H5 F5H8J9 H1ZZW4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000331581.6	CADM1-003	1766	471aa	ENSP00000329797.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0H5 F5H8J9 Q9BY67	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542450.1	CADM1-015	833	110aa	ENSP00000442001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0H5 F5H8J9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543540.1	CADM1-013	629	79aa	ENSP00000439847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0H5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000545094.1	CADM1-014	581	182aa	ENSP00000439696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H125	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543249.1	CADM1-010	565	188aa	ENSP00000442227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000540951.1	CADM1-021	572	67aa	ENSP00000445375.1	Nonsense mediated decay		F5H372	-	-
ENST00000537140.1	CADM1-004	1646	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543375.1	CADM1-020	668	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545960.1	CADM1-011	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536781.1	CADM1-012	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000441886.2	CADM1-017	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000541434.1	CADM1-007	1112	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546000.1	CADM1-019	734	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540852.1	CADM1-018	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540373.1	CADM1-016	335	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: CADM1 ENSG00000182985

Summary