Description
CCR4-NOT transcription complex, subunit 10 [Source:HGNC Symbol;Acc:23817]
Gene Synonyms
FLJ12890, FLJ13165
Location
Chromosome 3: 32,726,637-32,815,367 forward strand.
GRCh37:CM000665.1
About this gene
This gene has 20 transcripts (splice variants) and 206 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000454516.2 | CNOT10-201 | 2593 | 804aa | ENSP00000399862.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58822 | B7Z5B3 Q9H9A5 | NM_001256742.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000328834.5 | CNOT10-001 | 2815 | 744aa | ENSP00000330060.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2655 | B7Z5B3 Q9H9A5 | NM_015442.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000331889.6 | CNOT10-003 | 2573 | 717aa | ENSP00000329376.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58821 | Q9H9A5 | NM_001256741.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000538368.1 | CNOT10-202 | 2242 | 386aa | ENSP00000442552.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z5B3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000430408.1 | CNOT10-012 | 687 | 229aa | ENSP00000395385.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C0K1 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000435630.1 | CNOT10-002 | 2290 | 609aa | ENSP00000402795.1 | Nonsense mediated decay | E9PCN5 | - | - | |
| ENST00000416457.1 | CNOT10-004 | 2096 | 210aa | ENSP00000402979.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000455381.1 | CNOT10-010 | 770 | 43aa | ENSP00000392312.1 | Nonsense mediated decay | H7BZZ7 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000463697.1 | CNOT10-011 | 719 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000463006.1 | CNOT10-007 | 692 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000556853.1 | CNOT10-019 | 551 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000494439.1 | CNOT10-006 | 551 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000471003.2 | CNOT10-013 | 550 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473064.1 | CNOT10-017 | 530 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000466103.1 | CNOT10-009 | 303 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468599.1 | CNOT10-015 | 811 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000481526.1 | CNOT10-016 | 756 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485136.1 | CNOT10-008 | 608 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000479397.2 | CNOT10-014 | 474 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476967.1 | CNOT10-018 | 354 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
