Description
ADP-ribosylation-like factor 6 interacting protein 4 [Source:HGNC Symbol;Acc:18076]
Gene Synonyms
SFRS20, SR-25, SRp25, SRrp37
Location
Chromosome 12: 123,464,607-123,467,456 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 20 transcripts (splice variants) and 186 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000315580.5 | ARL6IP4-001 | 1644 | 360aa | ENSP00000313422.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q66PJ3 | NM_018694.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000543566.1 | ARL6IP4-002 | 1587 | 341aa | ENSP00000442718.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3V0L0 Q66PJ3 | NM_016638.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000453766.2 | ARL6IP4-003 | 1354 | 352aa | ENSP00000414847.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYV5 F8WCT1 Q66PJ3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000392435.2 | ARL6IP4-018 | 1339 | 338aa | ENSP00000376230.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BZV4 Q66PJ3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000454885.2 | ARL6IP4-004 | 1318 | 226aa | ENSP00000396723.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61273 | B3V0L1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000542099.1 | ARL6IP4-017 | 1119 | 307aa | ENSP00000442200.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7X4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000426960.2 | ARL6IP4-014 | 910 | 218aa | ENSP00000406036.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q66PJ3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000412505.2 | ARL6IP4-021 | 818 | 170aa | ENSP00000413132.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WEP2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000413381.2 | ARL6IP4-013 | 799 | 211aa | ENSP00000441406.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYV5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000439686.2 | ARL6IP4-019 | 796 | 229aa | ENSP00000396365.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYV5 F8WCT1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000456762.2 | ARL6IP4-015 | 796 | 216aa | ENSP00000391598.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BZV4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000357866.4 | ARL6IP4-011 | 546 | 181aa | ENSP00000350532.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q66PJ3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000539770.1 | ARL6IP4-005 | 1295 | 215aa | ENSP00000438969.1 | Nonsense mediated decay | Q66PJ3 | - | - | |
| ENST00000540708.1 | ARL6IP4-006 | 1782 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000539576.1 | ARL6IP4-012 | 1684 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000540382.1 | ARL6IP4-009 | 1677 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000392433.3 | ARL6IP4-010 | 1370 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000536502.1 | ARL6IP4-007 | 1273 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000442210.2 | ARL6IP4-016 | 716 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000536073.1 | ARL6IP4-022 | 562 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
