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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HOXC10 ENSG00000180818

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Description

homeobox C10 [Source:HGNC Symbol;Acc:5122]

Gene Synonyms

HOX3I

Location

Chromosome 12: 54,378,849-54,384,063 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 5 transcripts (splice variants), 200 orthologues and 42 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303460.4	HOXC10-001	1936	342aa	ENSP00000307321.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8868	D6RAG4 Q53XI4 Q9NYD6	NM_017409.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000515593.1	HOXC10-002	526	127aa	ENSP00000421946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAG4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511575.1	HOXC10-003	887	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513413.2	HOXC10-005	799	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514415.1	HOXC10-004	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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