Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HOXC9 ENSG00000180806

.

Description

homeobox C9 [Source:HGNC Symbol;Acc:5130]

Gene Synonyms

HOX3, HOX3B

Location

Chromosome 12: 54,388,679-54,397,121 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 42 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303450.4	HOXC9-001	1516	260aa	ENSP00000302836.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8869	P31274	NM_006897.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508190.1	HOXC9-002	1505	260aa	ENSP00000423861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8869	P31274	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000504557.1	HOXC9-003	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

.

Summary

.

.