Description
histocompatibility (minor) HA-1 [Source:HGNC Symbol;Acc:17102]
Gene Synonyms
ARHGAP45, HA-1, HLA-HA1, KIAA0223
Location
Chromosome 19: 1,065,922-1,086,627 forward strand.
GRCh37:CM000681.1
About this gene
This gene has 17 transcripts (splice variants), 212 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000539243.2 | HMHA1-001 | 3822 | 1152aa | ENSP00000439601.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58637 | O78181 Q92619 | NM_001258328.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000313093.2 | HMHA1-002 | 4264 | 1136aa | ENSP00000316772.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32863 | O78181 Q92619 | NM_012292.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000590214.1 | HMHA1-003 | 4191 | 1163aa | ENSP00000466401.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EM85 O78181 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000586866.1 | HMHA1-007 | 4120 | 1140aa | ENSP00000468615.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ES98 O78181 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000543365.1 | HMHA1-004 | 3750 | 1019aa | ENSP00000438979.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H1R4 | NM_001282335.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000536472.1 | HMHA1-201 | 3339 | 1004aa | ENSP00000445109.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4A3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000590577.1 | HMHA1-005 | 3262 | 771aa | ENSP00000468607.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ES92 | NM_001282334.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000587186.1 | HMHA1-010 | 539 | 170aa | ENSP00000467741.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EQA4 O78181 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592335.1 | HMHA1-013 | 398 | 51aa | ENSP00000467525.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EPT4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000587602.1 | HMHA1-006 | 3339 | 60aa | ENSP00000466365.1 | Nonsense mediated decay | K7EM55 | - | - | |
| ENST00000591169.1 | HMHA1-018 | 871 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000590512.1 | HMHA1-016 | 551 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000592297.1 | HMHA1-009 | 1563 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586378.1 | HMHA1-017 | 938 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586937.1 | HMHA1-015 | 805 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000591293.1 | HMHA1-011 | 647 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586033.1 | HMHA1-014 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
