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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC43 ENSG00000180329

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Description

coiled-coil domain containing 43 [Source:HGNC Symbol;Acc:26472]

Gene Synonyms

FLJ31795

Location

Chromosome 17: 42,750,437-42,767,147 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 5 transcripts (splice variants) and 219 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315286.8	CCDC43-001	2082	224aa	ENSP00000323782.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45704	Q96MW1	NM_144609.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588210.1	CCDC43-002	2067	227aa	ENSP00000467630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86WV7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000457422.2	CCDC43-003	2058	154aa	ENSP00000400845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45705	Q96MW1	NM_001099225.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588687.1	CCDC43-005	721	110aa	ENSP00000468079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592333.1	CCDC43-004	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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