Description
septin 1 [Source:HGNC Symbol;Acc:2879]
Gene Synonyms
DIFF6, LARP, PNUTL3, SEP1
Location
Chromosome 16: 30,389,454-30,407,312 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 11 transcripts (splice variants), 105 orthologues and 12 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000321367.3 | SEPT1-001 | 1592 | 414aa | ENSP00000324511.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10678 | H3BS29 J3KNL2 S4R362 | NM_052838.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000571393.1 | SEPT1-201 | 1589 | 367aa | ENSP00000460441.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BS29 Q8WYJ6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000566517.1 | SEPT1-004 | 1080 | 311aa | ENSP00000456512.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BS29 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000572252.1 | SEPT1-003 | 1279 | 70aa | ENSP00000459780.1 | Nonsense mediated decay | I3L2M1 | - | - | |
| ENST00000568577.1 | SEPT1-008 | 782 | 46aa | ENSP00000456541.2 | Nonsense mediated decay | H3BS52 | - | - | |
| ENST00000570039.1 | SEPT1-009 | 587 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000567783.1 | SEPT1-010 | 551 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000563957.2 | SEPT1-002 | 2738 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000573615.1 | SEPT1-011 | 1616 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000563743.1 | SEPT1-006 | 620 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562152.1 | SEPT1-005 | 467 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
