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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SHARPIN ENSG00000179526

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Description

SHANK-associated RH domain interactor [Source:HGNC Symbol;Acc:25321]

Gene Synonyms

DKFZP434N1923, SIPL1

Location

Chromosome 8: 145,153,536-145,163,027 reverse strand.

GRCh37:CM000670.1

About this gene

This gene has 10 transcripts (splice variants), 320 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398712.2	SHARPIN-001	1765	387aa	ENSP00000381698.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43777	H0YCU2 Q9H0F6	NM_030974.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000532536.1	SHARPIN-011	533	95aa	ENSP00000432355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YCU2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000359551.6	SHARPIN-002	1687	326aa	ENSP00000352551.6	Nonsense mediated decay		Q6PJD5 Q9H0F6	-	-
ENST00000533948.1	SHARPIN-004	981	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534242.1	SHARPIN-005	933	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533184.1	SHARPIN-008	352	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530216.1	SHARPIN-009	673	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534435.1	SHARPIN-006	656	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531375.1	SHARPIN-007	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525275.1	SHARPIN-010	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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