Description
CDC-like kinase 3 [Source:HGNC Symbol;Acc:2071]
Gene Synonyms
PHCLK3, PHCLK3/152, clk3
Location
Chromosome 15: 74,890,841-74,932,057 forward strand.
GRCh37:CM000677.1
About this gene
This gene has 29 transcripts (splice variants) and 4 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000395066.3 | CLK3-003 | 2621 | 638aa | ENSP00000378505.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45304 | B3KTV2 H3BRE4 H3BRT8 H3BTW9 H3BUL5 H3BVF8 P49761 | NM_001130028.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000345005.4 | CLK3-001 | 1846 | 490aa | ENSP00000344112.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10265 | B3KTV2 H3BRE4 H3BRT8 H3BTW9 H3BUL5 H3BVF8 P49761 | NM_003992.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000352989.5 | CLK3-202 | 1662 | 467aa | ENSP00000323106.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KTV2 G5E959 H3BRE4 H3BRT8 H3BTW9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000348245.3 | CLK3-201 | 1634 | 152aa | ENSP00000321136.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQR7 H3BRT8 P49761 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000568139.1 | CLK3-013 | 918 | 306aa | ENSP00000455762.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQG1 H3BTW9 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000563842.1 | CLK3-019 | 860 | 190aa | ENSP00000456202.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRE4 H3BTW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564096.1 | CLK3-015 | 805 | 239aa | ENSP00000458099.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRT8 H3BUL5 H3BVF8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566126.1 | CLK3-010 | 732 | 224aa | ENSP00000457696.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRT8 H3BUL5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566926.1 | CLK3-023 | 646 | 193aa | ENSP00000454961.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BNQ5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000563418.1 | CLK3-024 | 575 | 70aa | ENSP00000456431.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000562389.1 | CLK3-009 | 572 | 117aa | ENSP00000456399.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRT8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562670.1 | CLK3-014 | 544 | 145aa | ENSP00000455905.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQR7 H3BRT8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563297.1 | CLK3-016 | 526 | 19aa | ENSP00000457362.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BTW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000568488.1 | CLK3-027 | 481 | 160aa | ENSP00000457936.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRT8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000483723.1 | CLK3-002 | 1749 | 152aa | ENSP00000431825.1 | Nonsense mediated decay | H3BQR7 H3BRT8 P49761 | - | - | |
| ENST00000564468.1 | CLK3-020 | 929 | 59aa | ENSP00000454785.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000569063.1 | CLK3-026 | 833 | 173aa | ENSP00000456278.1 | Nonsense mediated decay | H3BQR7 H3BRK0 H3BRT8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000564353.1 | CLK3-011 | 2847 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000561673.1 | CLK3-025 | 639 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000567992.1 | CLK3-012 | 603 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000567805.1 | CLK3-021 | 327 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000454830.2 | CLK3-008 | 3787 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000569406.1 | CLK3-006 | 3591 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562078.1 | CLK3-004 | 2455 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000568605.1 | CLK3-007 | 1047 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000568232.1 | CLK3-005 | 958 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570296.1 | CLK3-017 | 916 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562626.1 | CLK3-022 | 812 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000563112.1 | CLK3-018 | 665 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
