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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: GEN1 ENSG00000178295

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Description

GEN1 Holliday junction 5' flap endonuclease [Source:HGNC Symbol;Acc:26881]

Gene Synonyms

FLJ40869, Gen

Location

Chromosome 2: 17,935,125-17,966,632 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 7 transcripts (splice variants), 208 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381254.2	GEN1-201	6367	908aa	ENSP00000370653.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1691	E9PLG0 E9PM30 Q17RS7	NM_001130009.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000317402.7	GEN1-001	5722	908aa	ENSP00000318977.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1691	E9PLG0 E9PM30 Q17RS7	NM_182625.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528873.1	GEN1-005	871	290aa	ENSP00000431542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YCG6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000524465.1	GEN1-002	593	126aa	ENSP00000435143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLG0 E9PM30	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532257.1	GEN1-003	498	93aa	ENSP00000433180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM30	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534451.1	GEN1-006	457	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534669.1	GEN1-004	435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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