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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C12orf54 ENSG00000177627

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Description

chromosome 12 open reading frame 54 [Source:HGNC Symbol;Acc:28553]

Gene Synonyms

HSD-29, HSD-30, MGC35033

Location

Chromosome 12: 48,876,286-48,890,295 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 6 transcripts (splice variants) and 54 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314014.2	C12orf54-201	887	127aa	ENSP00000316898.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8764	H0YIT5 Q6X4T0	NM_152319.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000548364.1	C12orf54-001	687	127aa	ENSP00000447109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8764	H0YIT5 Q6X4T0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380491.3	C12orf54-002	820	101aa	ENSP00000369859.3	Nonsense mediated decay		C9IYT5	-	-
ENST00000549398.1	C12orf54-004	506	71aa	ENSP00000450103.1	Nonsense mediated decay		H0YIT5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000548913.1	C12orf54-005	693	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551266.1	C12orf54-003	490	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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