Description
clavesin 1 [Source:HGNC Symbol;Acc:23139]
Gene Synonyms
C6orf212L, CRALBPL, MGC34646, RLBP1L1
Location
Chromosome 8: 61,969,717-62,414,204 forward strand.
GRCh37:CM000670.1
About this gene
This gene has 11 transcripts (splice variants), 203 orthologues and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000519846.1 | CLVS1-003 | 3622 | 354aa | ENSP00000428402.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6176 | E5RI68 E5RK22 G3V122 Q8IUQ0 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000325897.4 | CLVS1-001 | 3486 | 354aa | ENSP00000325506.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6176 | E5RI68 E5RK22 G3V122 Q8IUQ0 | NM_173519.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000518592.1 | CLVS1-004 | 2880 | 75aa | ENSP00000429869.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RI68 G3V122 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000524095.1 | CLVS1-009 | 709 | 2aa | ENSP00000428174.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000520712.1 | CLVS1-007 | 661 | 59aa | ENSP00000429544.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RI68 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000522621.1 | CLVS1-011 | 552 | 79aa | ENSP00000428986.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RK22 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000523868.1 | CLVS1-005 | 582 | 42aa | ENSP00000429244.1 | Nonsense mediated decay | E5RJ00 | - | - | |
| ENST00000518858.1 | CLVS1-006 | 2980 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000521189.1 | CLVS1-002 | 2532 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000522928.1 | CLVS1-010 | 464 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000518426.1 | CLVS1-008 | 312 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
