Description
solute carrier family 38, member 9 [Source:HGNC Symbol;Acc:26907]
Gene Synonyms
FLJ90709, SLC38A9
Location
Chromosome 5: 54,921,673-55,069,022 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 27 transcripts (splice variants), 209 orthologues and 15 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000396865.2 | SLC38A9-001 | 2927 | 561aa | ENSP00000380074.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3968 | B3KVK8 D6R9X0 D6RDH2 D6RER8 D6RG31 D6RHW0 D6RIW7 E7ESU6 Q8NBW4 | NM_173514.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000539768.1 | SLC38A9-203 | 4032 | 462aa | ENSP00000437771.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9X0 D6RDH2 D6RER8 D6RG31 D6RHW0 D6RIW7 E7ESU6 Q8NBW4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000515629.1 | SLC38A9-004 | 2673 | 498aa | ENSP00000420934.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58947 | B3KVK8 D6RER8 D6RG31 D6RHW0 Q8NBW4 | NM_001258286.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000318672.3 | SLC38A9-201 | 2368 | 561aa | ENSP00000316596.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3968 | B3KVK8 D6R9X0 D6RDH2 D6RER8 D6RG31 D6RHW0 D6RIW7 E7ESU6 Q8NBW4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000416547.2 | SLC38A9-202 | 2225 | 437aa | ENSP00000397429.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KVK8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000512595.1 | SLC38A9-005 | 1756 | 498aa | ENSP00000427335.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58948 | D6RER8 D6RG31 D6RHW0 Q8NBW4 | NM_001258287.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000511233.1 | SLC38A9-006 | 1399 | 455aa | ENSP00000423219.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9Q7 D6R9X0 D6RDH2 D6RER8 D6RHW0 D6RIW7 E7ESU6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000512208.1 | SLC38A9-016 | 731 | 187aa | ENSP00000426413.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RER8 D6RG31 D6RHW0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503817.1 | SLC38A9-021 | 625 | 102aa | ENSP00000424918.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RER8 D6RHW0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000513993.1 | SLC38A9-012 | 571 | 96aa | ENSP00000422843.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9X0 D6RDH2 D6RIW7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000502247.1 | SLC38A9-017 | 556 | 36aa | ENSP00000427624.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RHW0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503891.1 | SLC38A9-010 | 541 | 131aa | ENSP00000425055.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9X0 D6RDH2 D6RHW0 D6RIW7 E7ESU6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000513275.1 | SLC38A9-013 | 508 | 26aa | ENSP00000425842.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RIW7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507109.1 | SLC38A9-009 | 468 | 37aa | ENSP00000420950.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RDH2 D6RIW7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000506624.1 | SLC38A9-015 | 370 | 37aa | ENSP00000425259.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RDH2 D6RIW7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508124.1 | SLC38A9-002 | 2370 | 43aa | ENSP00000426925.1 | Nonsense mediated decay | D6RDH2 D6RE72 D6RIW7 | - | - | |
| ENST00000505708.1 | SLC38A9-008 | 2324 | 397aa | ENSP00000427707.1 | Nonsense mediated decay | D6RER8 D6RG31 D6RHF5 D6RHW0 | - | - | |
| ENST00000505563.1 | SLC38A9-020 | 950 | 43aa | ENSP00000424271.1 | Nonsense mediated decay | D6RBB9 D6RDH2 D6RIW7 | - | - | |
| ENST00000504880.1 | SLC38A9-003 | 2040 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000515754.1 | SLC38A9-022 | 701 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000502416.1 | SLC38A9-011 | 562 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000524030.1 | SLC38A9-024 | 429 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000507216.1 | SLC38A9-014 | 290 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000515159.1 | SLC38A9-007 | 3509 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000514806.1 | SLC38A9-019 | 760 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000507447.1 | SLC38A9-018 | 507 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000524154.1 | SLC38A9-023 | 470 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
