Description
sphingosine kinase 1 [Source:HGNC Symbol;Acc:11240]
Gene Synonyms
SPHK, SPK
Location
Chromosome 17: 74,372,665-74,383,941 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 10 transcripts (splice variants) and 4 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000545180.1 | SPHK1-006 | 2238 | 384aa | ENSP00000440970.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45785 | K7EJ32 K7EMA4 Q53ZR5 Q9BTG7 Q9NYA1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000323374.4 | SPHK1-001 | 2138 | 470aa | ENSP00000313681.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11744 | K7EJ32 K7EMA4 Q53ZR5 Q9BTG7 Q9NYA1 | NM_182965.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000590959.1 | SPHK1-003 | 1851 | 398aa | ENSP00000468547.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59297 | Q9BTG7 Q9NYA1 | NM_021972.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000592299.1 | SPHK1-002 | 1821 | 384aa | ENSP00000465726.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45785 | K7EJ32 K7EMA4 Q53ZR5 Q9BTG7 Q9NYA1 | NM_001142601.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000392496.3 | SPHK1-004 | 1779 | 384aa | ENSP00000376285.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45785 | K7EJ32 K7EMA4 Q53ZR5 Q9BTG7 Q9NYA1 | NM_001142602.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000588682.1 | SPHK1-009 | 858 | 152aa | ENSP00000466422.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJ32 K7EMA4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000590379.1 | SPHK1-010 | 588 | 111aa | ENSP00000465002.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJ32 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591651.1 | SPHK1-008 | 541 | 5aa | ENSP00000468474.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591762.1 | SPHK1-005 | 2502 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000587167.1 | SPHK1-011 | 456 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
