Description
proteasomal ATPase-associated factor 1 [Source:HGNC Symbol;Acc:25687]
Gene Synonyms
FLJ11848, PAAF, Rpn14, WDR71
Location
Chromosome 11: 73,587,744-73,638,790 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 15 transcripts (splice variants), 127 orthologues and 14 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000310571.3 | PAAF1-001 | 1604 | 392aa | ENSP00000311665.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8226 | F5H3E9 Q9BRP4 | NM_025155.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544909.1 | PAAF1-007 | 1802 | 393aa | ENSP00000438071.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0C4 F5H3E9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000535604.1 | PAAF1-002 | 1695 | 277aa | ENSP00000438789.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58158 | F5H3E9 Q9BRP4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000536003.1 | PAAF1-005 | 1639 | 375aa | ENSP00000438124.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58157 | F5H103 F5H3E9 F5H3I1 Q9BRP4 | NM_001267805.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544552.1 | PAAF1-006 | 1612 | 375aa | ENSP00000441494.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58157 | F5H103 F5H3E9 F5H3I1 Q9BRP4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000376384.5 | PAAF1-201 | 1491 | 375aa | ENSP00000365564.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58157 | F5H103 F5H3E9 F5H3I1 Q9BRP4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000541951.1 | PAAF1-003 | 1383 | 277aa | ENSP00000441333.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58158 | F5H3E9 Q9BRP4 | NM_001267806.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000504441.2 | PAAF1-008 | 975 | 237aa | ENSP00000439747.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H103 F5H3E9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543814.1 | PAAF1-009 | 882 | 247aa | ENSP00000438894.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H103 F5H3E9 F5H3I1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000546039.1 | PAAF1-011 | 805 | 161aa | ENSP00000439877.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0F7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542293.1 | PAAF1-010 | 667 | 100aa | ENSP00000439143.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H3E9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000536582.1 | PAAF1-013 | 582 | 150aa | ENSP00000443473.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000540659.1 | PAAF1-014 | 349 | 117aa | ENSP00000442434.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000543079.1 | PAAF1-012 | 390 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000381783.4 | PAAF1-004 | 2020 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
