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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PARL ENSG00000175193

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Description

presenilin associated, rhomboid-like [Source:HGNC Symbol;Acc:18253]

Gene Synonyms

PRO2207, PSARL, PSARL1, PSENIP2, RHBDS1

Location

Chromosome 3: 183,547,173-183,602,721 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 10 transcripts (splice variants), 270 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317096.4	PARL-001	1414	379aa	ENSP00000325421.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3248	Q9H300	NM_018622.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000311101.5	PARL-002	1240	329aa	ENSP00000310676.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33897	Q9H300	NM_001037639.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000435888.1	PARL-007	1098	295aa	ENSP00000402137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JNP8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000417784.1	PARL-009	722	171aa	ENSP00000398043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000418450.1	PARL-010	546	112aa	ENSP00000392926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000450375.1	PARL-008	488	63aa	ENSP00000402689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1V6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000449306.1	PARL-005	476	159aa	ENSP00000396691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000421484.1	PARL-004	1347	173aa	ENSP00000404421.1	Nonsense mediated decay		F8WCQ4	-	-
ENST00000488202.1	PARL-006	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469056.1	PARL-003	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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