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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ABLIM3 ENSG00000173210

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Description

actin binding LIM protein family, member 3 [Source:HGNC Symbol;Acc:29132]

Gene Synonyms

KIAA0843

Location

Chromosome 5: 148,521,046-148,640,105 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 12 transcripts (splice variants), 281 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000506113.1	ABLIM3-002	4569	683aa	ENSP00000425394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4294	O94929	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000309868.7	ABLIM3-001	4326	683aa	ENSP00000310309.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4294	O94929	NM_014945.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000326685.7	ABLIM3-006	4164	588aa	ENSP00000315841.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94929	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000504238.1	ABLIM3-004	2774	544aa	ENSP00000421183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94929	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000517451.1	ABLIM3-011	2287	169aa	ENSP00000430150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94929	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508983.1	ABLIM3-005	2011	650aa	ENSP00000420855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94929	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000356541.3	ABLIM3-201	1886	544aa	ENSP00000348938.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94929	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000515171.1	ABLIM3-003	4178	151aa	ENSP00000421002.1	Nonsense mediated decay		D6RHE7	-	-
ENST00000519549.1	ABLIM3-012	466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502855.1	ABLIM3-010	778	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514212.1	ABLIM3-009	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515796.1	ABLIM3-008	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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