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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: EFCAB12 ENSG00000172771

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Description

EF-hand calcium binding domain 12 [Source:HGNC Symbol;Acc:28061]

Gene Synonyms

C3orf25

Location

Chromosome 3: 129,120,164-129,147,494 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 5 transcripts (splice variants), 128 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000505956.1	EFCAB12-001	2154	572aa	ENSP00000420854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54638	Q6NXP0	NM_207307.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000326085.3	EFCAB12-201	2153	572aa	ENSP00000324241.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NXP0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000503957.1	EFCAB12-004	618	158aa	ENSP00000421462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503498.1	EFCAB12-002	5607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514900.1	EFCAB12-003	3249	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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